BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017H07SP1|AL427221
(915 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig799 671 0.0
3x_Contig596 262 1e-69
>3x_Contig799
Length = 3669
Score = 671 bits (326), Expect = 0.0
Identities = 445/497 (89%), Gaps = 1/497 (0%)
Strand = Plus / Minus
Query: 411 tgcttwttgctgatawagccaattttatkwtgcgtgatccagawatctttgtcwctgagc 470
||||| ||||||| | ||||||| |||| ||||||||||||| ||||||||| ||||||
Sbjct: 3662 tgcttattgctgaaaaagccaatattataatgcgtgatccagaaatctttgtcactgagc 3603
Query: 471 tatgttawwctggcagawtggttgatttttcttcaagccacgawttgagctcwtttttta 530
||||| | |||||||| ||||||||||||||||||||||||| |||||||| ||||| |
Sbjct: 3602 tatgtaaaactggcagaatggttgatttttcttcaagccacgaattgagctcatttttaa 3543
Query: 531 tgatgcgagttccagaggaaaattatgatagattagacatagttccatctgctgttgttt 590
||| ||||||||||||||||||| |||| ||| |||||||||||||||| |||| |||
Sbjct: 3542 tgaagcgagttccagaggaaaataatgaaagaatagacatagttccatcagctgatgtaa 3483
Query: 591 tattcwttwwtwgakcatccattgttgatcttttactctcgcagttgatggctgcctact 650
||||| | || |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 3482 tattcaataaaagaacatccattgtagatcttttactctcgcagttgatggctgcctaca 3423
Query: 651 awtttgattggctaacggtaccagctacnccaaaggtngncgnntttaagtctaaaaaga 710
| ||||||||||||| |||||| || ||||||| | || |||||||||||||
Sbjct: 3422 aaaaagattggctaacggaaccagcaacaccaaaggaagacgaaaaaaagtctaaaaaga 3363
Query: 711 agcaaagattagaagtwaaggcttccaaaaacccaatctgtgcatacatgatattycttt 770
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 3362 agcaaagattagaagtaaaggcttccaaaaacccaatctgtgcatacatgatattccttt 3303
Query: 771 tgatagttttgatggwacttttgtccagctacaatcattctaagtatgagtttatgactt 830
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3302 tgaaagttttgatggaacttttgtccagctacaatcattctaagtatgagtttatgactt 3243
Query: 831 ttaacaagcggggaatttatagtgaatcaccagcacctcgtactactgctttaaactttt 890
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3242 ttaacaagcggggaatttatagtgaatcaccagcacctcgtactactgctttaaac-ttt 3184
Query: 891 ttcattcaccaactttt 907
|||||||||||||||||
Sbjct: 3183 ttcattcaccaactttt 3167
>3x_Contig596
Length = 2286
Score = 262 bits (127), Expect = 1e-69
Identities = 164/180 (91%), Gaps = 2/180 (1%)
Strand = Plus / Plus
Query: 1 tatgaagaggtgccaatggttttcaaattgccagahataccgacgcgtagatgtgcaaca 60
|||||||||||||||| || ||||||| ||||||| |||||||| |||||||||||||||
Sbjct: 2109 tatgaagaggtgccaacggatttcaaaatgccagaaataccgac-cgtagatgtgcaaca 2167
Query: 61 tctatcctctaawgataawgagaccwttttcawtgtgttaatwagagttcctgadatatc 120
|||||||||||| ||||| |||||| |||||| ||||||||| ||||||||||| |||||
Sbjct: 2168 tctatcctctaaagataaagagaccattttcaatgtgttaataagagttcctgaaatatc 2227
Query: 121 tgatttctactcttctttggccatttctcgtwttttwatactctttgctgcaawtgaaaa 180
||||||||||||||||||||||||||||||| |||| ||||||| ||||||| ||||||
Sbjct: 2228 tgatttctactcttctttggccatttctcgtatttt-atactctatgctgcanatgaaaa 2286
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.43 0.719 1.35
Gapped
Lambda K H
1.43 0.719 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4194
Number of Sequences: 1807
Number of extensions: 4194
Number of successful extensions: 90
Number of sequences better than 1.0e-20: 2
length of query: 915
length of database: 10,358,551
effective HSP length: 16
effective length of query: 899
effective length of database: 10,329,639
effective search space: 9286345461
effective search space used: 9286345461
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.8 bits)
S1: 11 (23.1 bits)
S2: 49 (101.4 bits)